MD-TASK
stable
Getting started
Introduction
Installation
Usage
General
Network Analysis
Pertubation Response Scanning
Dynamic Cross-Correlation
MD-TASK
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MD-TASK documentation
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MD-TASK documentation
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Getting started
Introduction
Contribute
Citing MD-TASK
License
Installation
Platform compatibility
Install system dependencies
Install Python dependencies
Download the project
Usage
General
Activating the virtual environment
Add MD-TASK to your PATH
Trajectory vs Topology
Reducing your trajectory
Test Data
Logging
Network Analysis
Measurements
Calculating BC and L
Calculating ΔL
Calculating ΔBC
Calculating Average BC and L (and standard deviation)
SNP Analysis - wild-type vs mutant trajectories
SNP Analysis - wild-type vs mutants heatmap
SNP Analysis - residue contact map
Pertubation Response Scanning
Performing PRS
Dynamic Cross-Correlation
Calculating dynamic cross-correlation
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